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M. Elise Lauterbur's Projects

discoal icon discoal

discoal is a coalescent simulation program capable of simulating models with recombination, selective sweeps, and demographic changes including population splits, admixture events, and ancient samples

feems icon feems

forked to make small changes

flex-sweep icon flex-sweep

Versatile tool for detecting selective sweeps with a variety of ages, strengths, starting allele frequencies, and completeness.

hapbin icon hapbin

Efficient program for calculating Extended Haplotype Homozygosity (EHH) and Integrated Haplotype Score (iHS)

ne icon ne

Code for effective population size coalescent analysis

orthocapture icon orthocapture

Facilitating Gene Capture Probe Creation for Non-Model Organisms

ph-scale icon ph-scale

"pH Scale" is an educational simulation in HTML5, by PhET Interactive Simulations.

ph-scale-basics icon ph-scale-basics

"pH Scale: Basics" is an educational simulation in HTML5, by PhET Interactive Simulations.

samtools icon samtools

This is *NOT* the official repository of samtools.

sepa-models icon sepa-models

Models for Concord Consortium's SEPA-Genome project

stdpopsim icon stdpopsim

A library of standard population genetic models

test-repo icon test-repo

This is a test repository for the class -- feel free to issue pull requests to this to learn how git works

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