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Garmire group's Projects

bc_imaging icon bc_imaging

Single-cell based prognosis modeling identifies new breast cancer survival subtypes by cell-cell interactions

caffe icon caffe

Caffe: a fast open framework for deep learning.

czi-rfa icon czi-rfa

Application to "Collaborative Computational Tools for the Human Cell Atlas" https://chanzuckerberg.com/initiatives/rfa

deep-review icon deep-review

A collaboratively written review paper on deep learning, genomics, and precision medicine

deepimpute icon deepimpute

An accurate and efficient deep learning method for single-cell RNA-seq data imputation

deepprog icon deepprog

Deep-Learning framework for multi-omic and survival data integration

granatumx icon granatumx

The next generation of graphical single-cell RNA-seq analysis pipeline for genomics scientists

methyliftover icon methyliftover

A utility to map bisulfite sequencing data to the Illumina 450K methylation CpG set

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