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3d-conv-ad

Implementation and testing of 3D convolutional neural networks for AD diagnosis

antspy

Advanced Normalization Tools in Python

bambi

BAyesian Model-Building Interface (BAMBI) in Python.

bayes-workshop

Materials for RTC workshop on Bayesian analysis with brms and stan

bayescog

bctpy

brain connectivity toolbox for python

best-of-python

🏆 A ranked list of awesome Python open-source libraries and tools. Updated weekly.

bids-matlab

MATLAB / Octave tools for BIDS datasets

bids-starter-kit

Collection of tutorials, wikis, and templates to get you started with creating BIDS compliant datasets

brain-browser

web-based image viewer for local brain images

brainart

create a mosaic of brain images to match any image template

brainfortlib-neuroimage-hub

Hub where all tasks related to preprocessing, processing, archiving, distribution and all other aspects of working with neuroimaging data.

build_average_model

Collection of scripts to create population-specific average anatomical models

cbig

cl-phase

Real-time Closed-loop phase-dependent EEG-TMS

cognitivemodelingworkshop

Workshop on Mathematical Modeling of Cognitive Processes

coil

HTML5 canvas game where you defeat enemies by wrapping enemies in your trail

connectomeviewer

Software Application for the Visualization and Analysis of Multi-Modal Multi-Scale Network and Neuroimaging Data with Python

cornerstone

JavaScript library to display interactive medical images including but not limited to DICOM

cornerstonetools

A framework for tools built on top of Cornerstone.

cs344

Introduction to Parallel Programming class code

deep-qc

Deep learning for MRI registration quality control

eeg-101

Interactive neuroscience tutorial app using Muse and React Native to teach EEG and BCI basics.

electric-field-modeling-resources

Head models, scripts, and examples for the analysis of TMS, TDCS, and TACS induced electric fields.

excel2latex

The Excel add-in for creating LaTeX tables

falcon

FALCON cortical surface extraction tool

fcn_notebooks

Functional Connectivity Notebooks

findplagarism

Find plagarism in text via a Google Search. You will need to tweak the input file to your specific format.

fmriprep-debug

fslpy

Python Interface for FSL Neuroimaging Tools