kundajelab Goto Github PK
Name: Kundaje Lab
Type: Organization
Bio: Compbio and machine learning code repositories from the Kundaje Lab at Stanford Genetics and Computer Science Depts.
Location: Stanford University
Name: Kundaje Lab
Type: Organization
Bio: Compbio and machine learning code repositories from the Kundaje Lab at Stanford Genetics and Computer Science Depts.
Location: Stanford University
utils/notes for LD calculation from 1000 genomes panel
Software to compute reproducibility and quality scores for Hi-C data
Algorithms for abstention, calibration and domain adaptation to label shift.
Collaboration with Montine, Chang, and Montgomery labs on Alzheimers / Parkinson's ATAC-seq analysis
mini-projects and utility functions that are useful across an array of projects that I am working on
apricot implements submodular optimization for the purpose of selecting subsets of massive data sets to train machine learning models quickly.
ATAC-seq and DNase-seq processing pipeline
A nucleotide-resolution, context-specific sequence annotation of the dynamic regulatory landscape of the human and mouse genomes
A place to track my scripts with git.
Place to start factoring out code from av scripts
A columnar data container that can be compressed.
BigDataScript (BDS) pipelines and modules
Bias correction -- GC and enzymatic bias
Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them
BPNet manuscript code.
Pipeline for gecco RNA-seq analysis
Cardiogenesis Repo
Multi-layer Recurrent Neural Networks (LSTM, GRU, RNN) for character-level language models in Torch
ChIP-nexus pipeline
ENCODE ChIP-seq pipeline
Identifies the location of a histone binding site from histone chip-seq narrowPeak calls.
Place to store code relevant to Jamboree
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.