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girder_web_components

Reusable Javascript and VueJS components for interacting with a Girder server.

grid-optuna

large_image

Python modules to work with large multiresolution images.

mhub-mhubio

Stores the MHub engine.

mhub-segdb

Database and tools for standardized segmentation codes.

miqa-annotate

A Medical Imaging Annotation Tool

miqa-phase1

A web application for medical imaging quality assurance

miqa-rms

Rhabdomyosarcoma batch interface based on miqa

multinet-api

multinet-client

Multinet web client application

multinet_scripts

scripts to process multinet data for additional network features and network simplification

nciauth

nciauth-girder3

pathoview

Annotation of Image Data by Assignment.

rms-infer-code-standalone

python scripts for RMS model inference. Working on DICOM export

rms_infer_docker

docker build process for containerizing the rms_infer_web

rms_infer_web

girder3-based inference for RMS models (segmentation,MYOD1 mutation, survivability)

viewers

OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages

viv-docker

build system for local copy of Viv application

wsi_infer_web

web app with python server and javascript front end. One or more applications can be run through the interface