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2016_crisprcascademodel

anemone

A super simple background job starter and monitor

aq-graphics

Aquarium SVG Graphics Library: An Aquarium Library

aquadocked

Install the Aquarium development environment with Docker.

aqualib

A library of example protocols for aquarium

aquarium-api-python

Python library for interacting with the aquarium web API

aquarium-bugs

A repo formerly for reporting bugs and feature requests related to the Aquarium software.

aquarium-high-throughput-culturing

Aquarium High Throughput Culturing: An Aquarium Workflow

aquaverse

The Aquarium Portal

beluga

Artificial Intelligence for Genetic Circuit Design

biofab-nursery

biofab_production

A copy of the BIOFAB production protocols.

ccl

This library has functions for parsing ccl (the language used by gro) into a set of C++ objects.

chum

Simple object recognintion, hand tracking, protocol walkthrough in Java

coral

Coral, a library and framework for specifying synthetic biology design processes.

cowfish

Cowfish: an Aquarium cytometry results analyzing package in Python

crush

Command line tools for developing Aquarium protocols

dnaworks

Automatic oligonucleotide design for PCR-based gene synthesis

ee590-f16

Fall 2016 - EE590 Class

elma

An event loop manager for reactive, embedded systems

elma_project

An example project that uses the Elma reactive systems library

engaltruism_scripts

enviro

Multi-agent, multi-user environment

flexostat-hardware-firmware

[Deprecated] Flexostat software has been grouped in a new organization

flexostat-interface

[Deprecated] Flexostat software has been grouped in a new organization

flow-cytometry

Flow Cytometry: An Aquarium Workflow

gofish

Create a Node JS module from Aquarium's Javascript API

gro

The gro bacterial micro-colony growth specification and simulation software. For more information see the gro website, listed below.

hp

Hydrophobic-Polar 2D Protein Model

image_processing_python