Comments (3)
Hi,
I have found my old example of applying NOM measurements to a parametric mirror and extracted it to a file examples/withRaycing/13_Warping/ExampleOfSlopeErrorMapToParametricMirror.py
in this repository.
It defines a distorted parametric mirror, with the distortions given in a 3-column file as (x, y, z). You should adapt it to your file structure and your definitions of x, y, z in the file.
import numpy as np
from scipy import ndimage
import xrt.backends.raycing.oes as roe
class EllipticalMirrorParamNOM(roe.EllipticalMirrorParam):
def __init__(self, *args, **kwargs):
kwargs = self.__pop_kwargs(**kwargs)
super().__init__(*args, **kwargs)
self.nom_read()
def __pop_kwargs(self, **kwargs):
self.waviness = kwargs.pop('figureError') # file name
return kwargs
def nom_read(self):
# here, the file self.waviness has this structure:
# x[mm] y[mm] z[nm]
# 30.00 29.75 -31.498373
# 30.50 29.75 -32.992258
# 31.00 29.75 -33.864061
# 31.50 29.75 -34.240630
# ...
xL, yL, zL = np.loadtxt(self.waviness, unpack=True)
nX = (yL == yL[0]).sum()
nY = (xL == xL[0]).sum()
x = xL[:nX]
y = yL[::nX]
z = zL.reshape((nY, nX))
dx = x[1] - x[0]
dy = y[1] - y[0]
b, a = np.gradient(z) # NOM x is along (our y) and y is across (our x)
# a, b = np.gradient(z) # NOM x is across and y is along
a = np.arctan(a/dy)
b = np.arctan(b/dx)
self.nom_rmsA = ((a**2).sum() / (nX * nY))**0.5
self.nom_rmsB = ((b**2).sum() / (nX * nY))**0.5
self.nom_splineZ = ndimage.spline_filter(z.T) * 1e-6 # mm to nm
self.nom_splineA = ndimage.spline_filter(a.T) * 1e-6 # rad to µrad
self.nom_splineB = ndimage.spline_filter(b.T) * 1e-6 # rad to µrad
self.nom_nX = nX
self.nom_nY = nY
self.nom_x = x
self.nom_y = y
def local_r_distorted(self, s, phi):
r = self.local_r(s, phi)
x, y, z = self.param_to_xyz(s, phi, r)
# if NOM x is along (our y) and y is across (our x):
coords = np.array([
(y/(self.nom_x[-1]-self.nom_x[0]) + 0.5) * (self.nom_nX-1),
(x/(self.nom_y[-1]-self.nom_y[0]) + 0.5) * (self.nom_nY-1)])
# coords.shape = (2, self.nrays)
z += ndimage.map_coordinates(self.nom_splineZ, coords, prefilter=True)
s1, phi1, r1 = self.xyz_to_param(x, y, z)
return r1 - r
def local_n_distorted(self, s, phi):
r = self.local_r(s, phi)
x, y, z = self.param_to_xyz(s, phi, r)
# if NOM x is along (our y) and y is across (our x):
coords = np.array([
(y/(self.nom_x[-1]-self.nom_x[0]) + 0.5) * (self.nom_nX-1),
(x/(self.nom_y[-1]-self.nom_y[0]) + 0.5) * (self.nom_nY-1)])
# coords.shape = (2, self.nrays)
a = ndimage.map_coordinates(self.nom_splineA, coords, prefilter=True)
b = ndimage.map_coordinates(self.nom_splineB, coords, prefilter=True)
return -a, -b
For the visualization of your NOM results you may want to examine the main example in the same folder.
from xrt.
It's really helpful. Greatly appreciate.
from xrt.
Hello
Need more help to understand the simulation results.
With a parabolic cylindrical mirror, when I copied the waveness figure error from warp.py, the results is correct. Then I modified the waveness figure error from cos function(only along ray direction) to a square wave function. I don't understand why there is bright line in the middle. I am expecting it should be a dark line as the other 2 dark lines, because it is the location with the biggest local_r_distorted and local_n_distorted just like the other 2 locations.
Thanks.
with cos function figure error:
with square wave function figure error:
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