Comments (1)
I am not sure if this fixes the problem you have.
The way the title describes the problem, CADD should fail the following code:
touch empty.vcf
./CADD.sh empty.vcf
which does not happen. Neither is an error observed if the file input file is not empty but only contains a comment line
The associated bugfix fixes what happens when no input file is specified at all or if the specified input file does not exist. However, none of this is associated with any 'Snakemake crash', so please describe the problem in detail.
from cadd-scripts.
Related Issues (20)
- CADD is reporting SNV as intergenic when it is CDS HOT 1
- Which prescored files are necessary? HOT 5
- Micromambra vs miniconda HOT 1
- Request multiple cores and Solve possible precedence issue with control flow operator HOT 10
- Dependancy Error on CADD installation HOT 2
- CADD error while running
- annotation error HOT 1
- Bump mmsplice version HOT 7
- Error creating mmsplice enviroment HOT 9
- CADD still using Python 2.7 HOT 3
- Synonymous variants are scored higher HOT 2
- Error in rule annotate_regseq HOT 2
- CADD v1.7 on Docker HOT 13
- RegSeq fails for indels with length greater than 249 HOT 2
- how to get CADD for variants on chrX HOT 2
- annotate_esm error HOT 11
- WorkflowError: Missing Input files for rule prescore HOT 8
- Installation Issue HOT 1
- Error creating envs HOT 3
- Error running CADD 1.7 HOT 4
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from cadd-scripts.