I am unable to get whizard to build within spack. I get the following error:
==> Installing whizard
==> No binary for whizard found: installing from source
==> Warning: Suspicious requests to set or unset 'CC' found
==> Warning: env.set('CC', os.path.join(link_dir, compiler.link_paths['cc'])) at /spack/lib/spack/spack/build_environment.py:225
==> Warning: ---> env.set('CXX', self.compiler.cxx) at /spack/var/spack/repos/builtin/packages/whizard/package.py:78
==> Warning: Suspicious requests to set or unset 'CXX' found
==> Warning: env.set('CXX', os.path.join(link_dir, compiler.link_paths['cxx'])) at /spack/lib/spack/spack/build_environment.py:228
==> Warning: ---> env.set('FC', self.compiler.fc) at /spack/var/spack/repos/builtin/packages/whizard/package.py:79
==> Warning: Suspicious requests to set or unset 'F77' found
==> Warning: env.set('F77', os.path.join(link_dir, compiler.link_paths['f77'])) at /spack/lib/spack/spack/build_environment.py:231
==> Warning: ---> at /spack/var/spack/repos/builtin/packages/whizard/package.py:81
==> Warning: Suspicious requests to set or unset 'FC' found
==> Warning: env.set('FC', os.path.join(link_dir, compiler.link_paths['fc'])) at /spack/lib/spack/spack/build_environment.py:234
==> Warning: ---> env.set('F77', self.compiler.fc) at /spack/var/spack/repos/builtin/packages/whizard/package.py:80
==> Fetching https://whizard.hepforge.org/downloads/?f=whizard-2.8.5.tar.gz
######################################################################## 100.0%
==> whizard: Executing phase: 'autoreconf'
==> whizard: Executing phase: 'configure'
==> whizard: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j12'
4 errors found in build log:
801 cp -f bigarray_module.ml bigarray_compat.ml
802 OCAMLC bigarray_compat.cmi
803 OCAMLC events.cmi
804 OCAMLOPT bigarray_compat.cmx
805 OCAMLOPT float.cmx
806 File "bigarray_compat.ml", line 1:
>> 807 Error: Could not find the .cmi file for interface bigarray_compat.mli.
808 OCAMLC diffmaps.cmi
>> 809 make[2]: *** [bigarray_compat.cmx] Error 2
810 make[2]: *** Waiting for unfinished jobs....
811 make[2]: Leaving directory `/tmp/root/spack-stage/spack-stage-whizard-2.8.5-v7sytfvqvg5rlybfssrkdslaemrat2qr/spack-src/circe2/src'
>> 812 make[1]: *** [all-recursive] Error 1
813 make[1]: Leaving directory `/tmp/root/spack-stage/spack-stage-whizard-2.8.5-v7sytfvqvg5rlybfssrkdslaemrat2qr/spack-src/circe2'
>> 814 make: *** [all-recursive] Error 1
See build log for details:
/tmp/root/spack-stage/spack-stage-whizard-2.8.5-v7sytfvqvg5rlybfssrkdslaemrat2qr/spack-build-out.txt
I can consistently reproduce it using the following container running centos7: https://hub.docker.com/repository/docker/tmadlener/ilcsof-cvmfs-install-centos7
One way to reproduce it is to first build a suitable gcc (e.g. [email protected] or [email protected]) using spack inside the container and then try to build whizard. However, this will take a few hours until all the necessary dependencies are built. A quicker way is to use the cvmfs installed packages as upstream. To do so, make sure to locally mount /cvmfs/sw.hsf.org and then start the container
docker run -it -v /cvmfs/sw.hsf.org:/cvmfs/sw.hsf.org tmadlener/ilcsof-cvmfs-install-centos7
Inside the container, setup spack and the correct environment
git clone https://github.com/spack/spack
git clone https://github.com/key4hep/k4-spack
. spack/share/spack/setup-env.sh
mkdir -p ~/.spack/linux
cp k4-spack/config/packages.yaml ~/.spack/linux
Add the upstream repository and load the pre-installed [email protected] and add it to the known compilers for spack
cat <<EOT >> $HOME/.spack/linux/upstreams.yaml
upstreams:
spack-instance-1:
install_tree: /cvmfs/sw.hsf.org/spackages/
EOT
spack load [email protected] && spack compiler findNow check that all the dependencies are present (specify a pythia8 version that is already installed, to not have to build the new default version 8303).
spack spec -Il whizard ^pythia8@8244
This should show only [email protected]/v7sytfv as missing package and trying to install it leads to the above described error
spack install whizard ^pythia8@8244
For completeness spack debug report yields the following as of writing this issue.
* **Spack:** 0.15.4-1359-796561e
* **Python:** 2.7.5
* **Platform:** linux-centos7-skylake
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