Comments (3)
Did you follow the guidelines and place the file into the right place:
# move the script to where the conda located
cp blastxml_to_tabular.py {path_to_conda}/envs/phabox/bin/blastxml_to_tabular.py
chmod 777 {path_to_conda}/envs/phabox/bin/blastxml_to_tabular.py
you can try to run the command below:
blastxml_to_tabular.py
to see whether the python script is executable.
from phabox.
from phabox.
good to know
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Related Issues (20)
- Illegal instruction HOT 3
- Cannot find pre-trained model HOT 7
- Typo? HOT 2
- [improvement] adding blastxml_to_tabular.py as an input parameter to the main.py function. HOT 5
- Conda [/Mamba] Installation Channel Priority Strict Error
- device.type == "cpu" HOT 4
- RuntimeError: CUDA out of memory issue HOT 5
- convert xml failed HOT 1
- How to get the full taxa of predicted hosts HOT 5
- why only have phagcn_prediction.csv phamer_prediction.csv phatyp_prediction.csv,but not cherry_prediction.csv HOT 11
- phagcn_prediction.csv not created in midfolder HOT 2
- different results between phagcn2 and phabox HOT 6
- Dependency issue with mamba/conda installation HOT 2
- Can this tool be directly installed through conda? HOT 3
- print(f'Database directory {db_dir} missing or unreadable') HOT 7
- Taxonomy classification: PhaGCN 2.0 vs PhaBOX HOT 2
- Error in build_pc_matrices Function: ValueError Due to Mismatched Index Arrays HOT 1
- Typo in installation guide HOT 2
- Clarification on "Unknown" vs. "No Family Available" in Phagcn Taxonomy Predictions HOT 1
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