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  • 👋 Hi there, I’m Tülay!
  • I’m a data enthusiast and bioinformatician.
  • I'm interested in data curation, big data analysis, modeling biomolecule structures, cancer progression and web development.

Tulay Karakulak's Projects

canisonet icon canisonet

Predicting pathogenic impact of isoform switches in 1209 cancer samples covering 27 cancer types using an isoform-specific interaction network

canisonet_web icon canisonet_web

Functional impact of cancer-specific isoform switching events: Visualization via STRING interaction network

ccrcc_sclongread icon ccrcc_sclongread

This repository has the codes to reproduce the figures in our paper on single-cell long-read RNA sequencing data of patient-derived ccRCC organoids

gtex-tcga-data-download icon gtex-tcga-data-download

Describes how to download RNA-Seq controlled data from GTEx via sra-toolkit and from TCGA via GDC Data Transfer Tool

mdttoolset icon mdttoolset

Detection of Most Dominant Transcripts and Their Switches

sta425dp_exercises icon sta425dp_exercises

This repository includes exercises of the course STA425DP - Fall semester 2020 - UZH

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