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justincy avatar justincy commented on May 30, 2024

Could you show me an example of how those values would be used to change the pedigree? Do you want to change the position or the color or something else?

from d3-pedigree-examples.

gpcr avatar gpcr commented on May 30, 2024

http://www.sciencedirect.com/science/article/pii/S0002929714004273

Table 1 expains the ibd values to relations:
Familial Relationship IBD
Parental 0
Full-sibling 0.25
Half-sibling, avuncular, and grandparental 0.5
First-cousin, great-grandparental, great-avuncular, and half-avuncular 0.75
Distantly related varies
Unrelated (includes relationships beyond the third degree) 1

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justincy avatar justincy commented on May 30, 2024

@gpcr Thanks. What is it that you need help with? Are you trying to generate a pedigree based on IBD values?

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gpcr avatar gpcr commented on May 30, 2024

Yes, how to use IBDs to get the pedigre plots

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justincy avatar justincy commented on May 30, 2024

Sorry but I don't know how to interpret IBD values, plus it's out of the scope of this repository. You linked to a paper about it. You can use that paper to generate data in the format used by the examples: https://github.com/justincy/d3-pedigree-examples/tree/gh-pages/data

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