Jun Yu's Projects
Copies of notebooks used in the practical sessions for Algorithms for DNA Sequencing
short scripts related with annotation, alignments, etc
Software sets up and runs an genome sequencing analysis workflow using AWS Batch and AWS Step Functions.
Genomics Workflows on AWS
Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency
Blast2Bam uses the XML results of Blastn, the reference and the fastQ or fasta file(s) to output a SAM file.
Course Files for Complete Python 3 Bootcamp Course on Udemy
Count the exon-exon junction split reads from RNA seq data
Contains files for the deep learning in genomics primer.
This repository contains all DeepCLIP Python code
Dicerna-RNA SEQ pipeline based on nf-core
identify pre-miRNAs using CNN models trained on huamn pre-miRNAs dataset
Pipeline to fetch metadata and raw FastQ files from public and private databases
刷算法全靠套路,认准 labuladong 就够了!English version supported! Crack LeetCode, not only how, but also why.
this is a software for sgRNA activity prediction with great generalization
This is a repository for the LinkedIn Learning course HTML for Programmers
iLearn, a Python Toolkit and Web Server Integrating the Functionality of Feature Calculation, Extraction, Clustering, Feature Selection, Feature Normalization, Dimension Reduction and Model Construction for Classification, Best Model Selection, Ensemble Learning and Result Visualization for DNA, RNA and Protein Sequences.
iLearnPlus is the first machine-learning platform with both graphical- and web-based user interface that enables the construction of automated machine-learning pipelines for computational analysis and predictions using nucleic acid and protein sequences.
Google IT Automation with Python Professional Certificate - Practice files
Config files for my GitHub profile.
A Python code for generating k-mer features for a set of DNA/ genomic sequences.
Learning the Variant Call Format
Public repo for DeepLearning.AI MLEP Specialization