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Name: Juan Diego Gaitan-Espitia
Type: User
Company: University of Hong Kong
Bio: Assistant Professor, School of Biological Sciences, University of Hong Kong
Location: Hong Kong, SAR, China
Name: Juan Diego Gaitan-Espitia
Type: User
Company: University of Hong Kong
Bio: Assistant Professor, School of Biological Sciences, University of Hong Kong
Location: Hong Kong, SAR, China
Basic command-line tutorial for phylogenetic analysis
Genome-wide de novo genotyping with 2bRAD
Genome-wide reference-based genotyping with 2bRAD
🌍 My contributions to the #30DayMapChallenge 2019
Pipeline for running sequencing analyses using dada2
ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark and Parquet. Apache 2 licensed.
Tools test whether admixture occurred and more
Advanced R: a book
Code used for configuration and administration of the bioinformatics computer cluster Albiorix at the Department of Biological and Environmental Sciences and Marine sciences, University of Gothenburg.
American Gut open-access data and IPython notebooks
#### Written by Emily Curd ([email protected]), Jesse Gomer ([email protected]), Gaurav Kandlikar ([email protected]), Zack Gold ([email protected]), Max Ogden ([email protected]), and Baochen Shi ([email protected]). Assistance was provided by Rachel Meyer ([email protected]).
Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved Domain Database and Nucleotide divisions, Gene Ontology, UniPathways and the Enzyme Commission. It gives information about the longest ORF (using DNA2PEP) and non-coding potential of the sequences (using Portrait). A final heuristic makes Annocript able to identify putative long non-coding RNAs among your transcripts. Like our facebook page to be always updated: https://www.facebook.com/annocript
Assembly and annotation of transcriptomes de novo
An Ansible Playbook to deploy RStudio Server
Population assignment analysis of genomic dataset (e.g. GBS/RADseq) using R
A curated list of the best bioinformatics books, all in one place
Bayesian Data Analysis demos for R
RStudio addin for formatting Rmarkdown tables
workshop in Berlin, mid-June 2017
workshop in Bern, Switzerland in Oct 2016
bioBakery tools for meta'omic profiling
Analysis of the bacterial sequences collected in the HEEP
Course material for introductory R / Bioconductor courses
Conda recipes for the bioconda channel.
My tool box for Bioinformatics
Bioinformatics Workbook repository
Course materials for BIOST561
Workshop tutorials for the 2017 Benthic Invertebrates, Metagenomics, and Bioinformatics Workshop in Corpus Christi, Tx (January 9-13, 2017)
Workshop materials for the Second Benthic Invertebrates, Metagenomics, and Bioinformatics Workshop at the TAMUCC Harte Institute in Corpus Christi, TX (January 15-19, 2018)
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.