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Joonatan Palmu's Projects

eicosanoidsbp icon eicosanoidsbp

Analysis code for eicosanoids-bp paper (doi:10.5281/zenodo.3562143)

finemapr icon finemapr

Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF

gwasvcf icon gwasvcf

Reading, querying and writing GWAS summary data in VCF format

lcv icon lcv

Software implementing the Latent Causal Variable Model

mia icon mia

Microbiome analysis

mixie icon mixie

Mendelian Randomization method robust to pleiotropy: mixIE (mixture of IVW and Egger)

mr-presso icon mr-presso

Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.

mr.raps icon mr.raps

R package for two-sample Mendelian randomization using the robust adjusted profile score

mrmix icon mrmix

R package for performing Mendelian Randomization using mixture models

pcicabg-death icon pcicabg-death

Analysis code for revascularisation and smoking paper (doi:10.1177/2047487319894883)

radialmr icon radialmr

An R package for fitting and visualising radial inverse variance weighted and radial MR-Egger models.

rrbiota-old icon rrbiota-old

Analysis code for gut mictobiota and bp paper (doi:10.5281/zenodo.3515019)

rrgutbiota icon rrgutbiota

Association Between Gut Microbiota and Hypertension

rrnmr icon rrnmr

Analysis code for gut mictobiota and bp paper (doi:10.5281/zenodo.3571878)

survbal icon survbal

An R package used for the selection of microbiome balances in relation to censored survival and time-to-event outcomes

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