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Zhang Jingjing's Projects

configs icon configs

Config files used to define parameters specific to compute environments at different Institutions

edit_pig icon edit_pig

Show partial codes to plot the circos and bar of gene editing pig

pipipes icon pipipes

piRNA pipeline collection developed in the Zamore Lab and ZLab in UMass Med School

single-cell-rcc-pipeline icon single-cell-rcc-pipeline

Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcinoma Associated with Clinical Outcome Identified Using Single-Cell Protein Activity Inference." Includes code for VIPER protein activity inference pipeline

temp icon temp

TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing data

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