jhwarlock Goto Github PK

breakdancer

SV detection from paired end reads mapping

cincalc

The method of calculating chromosome instability(CIN), based on the 'wGII' statistics

circosjs

d3 library to build circular graphs

deepwiki

A lightweight Markdown wiki system in PHP

django-ftpserver

FTP server application that used user authentication of Django.

docker-py

An API client for docker written in Python

gatb-core

Core library of the Genome Analysis Toolbox with de-Bruijn graph

gitignore

A collection of useful .gitignore templates

igv

Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

igv.js

Lightweight html5 version of the Integrative Genomics Viewer

mseq-cnv

phase

Code and tests for the phase software

py2cytoscape

Python utilities for Cytoscape and Cytoscape.js

pybind11

Seamless operability between C++11 and Python

pymc3

Probabilistic Programming in Python: Bayesian Modeling and Probabilistic Machine Learning with Theano

pysam

Pysam is a python module for reading and manipulating Samfiles. It's a lightweight wrapper of the samtools C-API. Pysam also includes an interface for tabix.

rblib

Some libs

rklib

Some practical tools

simpbs

Single node scheduling system

spqc-1.0.0

use for large scale samples data Quality control

testsphinxdoc

vpf-tools

Virus Protein Family tools