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jdiray's Projects

assemblathon icon assemblathon

Code that was used in the Assemblathon 1 and 2 projects

assemblathon2-analysis icon assemblathon2-analysis

collection of scripts and commands used by Ian Korf, Keith Bradnam, and Joe Fass in the analysis of Assemblathon 2 entries (assemblies)

asthma icon asthma

RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)

bowtie icon bowtie

Simple admin interface for MongoMapper (mongo) & DataMapper (dm) models.

cutadapt icon cutadapt

Automatically exported from code.google.com/p/cutadapt

klaper icon klaper

Scripts relating to a de novo RNA-Seq experiment that used Trinity.

scn icon scn

:school_satchel: The swirl Course Network - A Repository for swirl Courses

scw icon scw

HSCI/Catalyst Single-cell RNA-Seq Workshop

seqtools icon seqtools

Tools for sequence and alignment manipulation

wgcna icon wgcna

:exclamation: This is a read-only mirror of the CRAN R package repository. WGCNA — Weighted Correlation Network Analysis. Homepage: http://horvath.genetics.ucla.edu/html/CoexpressionNetwork/Rpackages/WGCNA/

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