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jbloom avatar jbloom commented on June 26, 2024

I think this is actually a server issue rather than alignparse issue. When running on the home rhino node, it often won't allow you to get any CPUs and will throw a memory error when you try.

Just try running with ncpus=1 if you are doing this on the home rhino node and it will probably work fine.

Or use grabnode to grab a node so you aren't running on home rhino.

Does this fix it?

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khdusenbury avatar khdusenbury commented on June 26, 2024

Yeah, was coming to the conclusion that the error was on my end. ncpus=1 fixed it. Thanks!

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