jayunruh Goto Github PK
Name: Jay Unruh
Type: User
Company: Stowers Institute
Location: Kansas City, MO
Jay Unruh's Projects
flim_tools
Python tools for linear unmixing and phasor analysis of FLIM data.
flowcytetools
Python tools to read, write, compensate, and gate flow cytometry files. This version has minimal complex dependencies.
imagej.github.io
The ImageJ wiki
jay_pdbtools
A collection of python tools to read pdb (protein data bank) structure files into a pandas data frame and perform calculations on them.
jay_plugins
ImageJ plugins from Jay
jay_plugins2
second plugins package
jay_plugins3
Third plugins package
jay_qpcr
Automation and analysis tools for qPCR testing
jay_serology
Python code for ELISA absorbance serology analysis.
list-of-update-sites
The update sites ImageJ knows about automatically
macros
some macros
napari-ip-workflow
Basic pre-processing/segmentation/measurement workflow for napari.
napari_jflowcyte
Tools to import, export, compensate, and gate (using Napari) flow cytometry files.
napari_jroitools
Napari plugins for reading and writing ImageJ roi files and creating image profiles.
nucleolar_segmentation_normality
Python version of tools to segment nucleoli and measure the enrichment of signals in them or Normality.
python_introds_course
Intro to python for data science using Pandas and Jupyter Notebooks
python_ip_course
Basic image processing course in python
simr_ontology
Controlled Vocabulary used at SIMR
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