Comments (1)
Hi,
This repo is for two seperate tools:
- MA, the aligner. MA works for the human genome.
- MSV, the structural variant caller. MSV only works with small genomes with very little repetitiveness such as the yeast genome. Currently we have no plans expanding MSV, sorry.
Best,
Markus
from ma.
Related Issues (16)
- Distribution via bioconda? HOT 1
- Preset for PacBio CCS? HOT 1
- compile error of cmake HOT 2
- cigar string HOT 2
- Feature request: output BAM and/or print to STDOUT HOT 4
- closely related species as a reference for seed HOT 2
- parse error at line 1, column 1: syntax error while parsing value - invalid literal; last read: '>' HOT 1
- Index out of range exception for paired end reads HOT 3
- How to run MA on short reads faster? HOT 5
- redirect sam to standard output for piping HOT 3
- Does MA supports memory mapping? HOT 2
- test_aligner.py class issue? HOT 1
- prebuilt binary for aarch64 platform HOT 1
- Can I use MA to align assembled contig to the reference genome? HOT 1
- Multiple identical alignments were produced in the output HOT 1
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