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annotorious

Image Annotation for the Web - Annotorious Core Library

atlas-d2k-docs

atlas-d2k-hra

atlas-d2k-py

atlas-d2k-www

Static site (Jekyll) code for the landing site for ATLAS-D2L (www.atlas-d2k.org)

bagit-profiles-validator

bagit-python

Work with BagIt packages from Python.

betacell-consortium

bigtiler

Bigtiler is an image tiler to convert from large imaging formats to tiled formats for web viewers.

cel-viewer

graphing viewer using plotly.js for CEL datafiles

cel-viewer-in-shiny

graphing viewer using plotly.R, shiny for gene expression datasets

chaise

An adaptive user interface for the Deriva platform.

chisel

CHiSEL: a high-level, user-oriented framework for schema evolution.

cirm-project

project repository for cirm. primarily for tracking tasks.

convert3d

Convert3D from http://www.itksnap.org/pmwiki/pmwiki.php?n=Convert3D.Downloads with changes from BIC, updated to ITKv5

cx_freeze

Scripts and modules for freezing Python scripts into executables.

dbix-dbstag

Relational Database to Hierarchical (Stag/XML) Mapping

deriva-catalog-manage

Deriva catalog management using deriva-py

deriva-client

An application suite of Python-based client software for use with the DERIVA platform.

deriva-client-bundle

Binary distributions of DERIVA Client Tools

deriva-client-bundle-docker

Docker images for building platform specific bundles of deriva-client

deriva-commons

Common data models, spreadsheets and other

deriva-docs

Top-level documentation for DERIVA software

deriva-docs-docker

Docker image used for building the DERIVA platform documentation suite.

deriva-imaging-pipeline

Tools and configuration for the DERIVA imaging pipeline

deriva-jbrowse-plugin

jbrowse plugin for reading tracks from the FaceBase catalog

deriva-load-testing

deriva-ml

modules and tools to streamline the use of derive catalogs with standard ML libraries.

deriva-platform

The Discovery Environment for Relational Information and Versioned Assets (DERIVA) platform is an asset management system designed to support scientific collaboration through the full lifecycle of data - from early experiment design, to data acquisition, analyses and ultimately publication.