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ICCC Major Category about algorithms HOT 8 CLOSED

howew avatar howew commented on August 30, 2024
ICCC Major Category

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Comments (8)

depryf avatar depryf commented on August 30, 2024

@howew would it be OK to add this as a second output of the ICCC algorithm? Right now the algorithm returns "iccc", it would also return "icccMajorCategory"?

The downside is that in your application, there won't be a way to have one without the other. I don't know if it's a deal breaker for you.

If we can't do that, then there will be an algorithm dependency; your application will need to make sure to run the ICCC one first before it can run the IcccMajorCategory...

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depryf avatar depryf commented on August 30, 2024

@garybeverungen can you please implement this new algorithm? You will need to add a new package/utility class, but also register a new "Algorithm" in the new framework (see Algorithms). Thanks.

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howew avatar howew commented on August 30, 2024

@depryf Isn't that similar to the way the survival calculations work? I'm fine with that.

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depryf avatar depryf commented on August 30, 2024

Yup, it's similar to that. Like I said, from your perspective, it means a user won't be able to add just the ICCC, your application will add both ICCC and ICCC Major Category together. I don't think it's an issue though, and so let's go with that for now. That will make this issue much simpler.

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depryf avatar depryf commented on August 30, 2024

The changes have been merged, they will be available with version 2.1.

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depryf avatar depryf commented on August 30, 2024

@howew the ICCC algorithm support two version (Third Edition and WHO); we are in the process of adding a third version (Third Edition/IARC 2017).

You provided the logic to compute the "ICCC major category". Does that logic apply to any version, or is it tied to one of those versions? It takes the "ICCC recode" value as an input, but that value is version-dependent. So it's not clear to me if the major category is supposed to work for all versions (including the new one we are adding) or if its tied to a specific version.

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howew avatar howew commented on August 30, 2024

The logic should apply to any version. I quickly compared the "main classification" columns in the following tables and I didn't spot any new main classifications. If there are new ones you can just update the ranges.

https://seer.cancer.gov/iccc/iccc-who2008.html
https://seer.cancer.gov/iccc/iccc-iarc-2017.html

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depryf avatar depryf commented on August 30, 2024

Great, thanks!

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