Suggestions: metadata for each cell and integrate with Seurat in single-cell VDJ scenario about immunarch

[EugeneRumynskiy]

Hello @YiweiNiu , it's been a while. Thank you for the ideas. Here is a couple of questions to clarify

First. Yep, this could be a potentially good feature. But first we need two things to understand better:

1. Potential range of typical tasks for comparison of different groups of cells. We need more examples.
2. A small sample of data for better understanding of data-problems you a trying to solve.
   So, as always, we need a bit more information from you.

Second. The same as the first. We need a bit data to understand it's format, and we need use-cases.

May be you have contacts of people who are in need of those features. It would be great to hear about their problems and see closer what are the main problems it current data-pipelines.

By the way. 'There are already such tries like this and this' - in this and this the links are similar. But we caught the idea :)

[vadimnazarov]

Hi @YiweiNiu , can you please send us an example repertoire data with metadata that you want to load into R via immunarch? Do you process this data via Seurat first?

[vadimnazarov]

Closed because no response.