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Hi there 👋

I’m Markus, a Bioinformatician at the Center for Computational and Theoretical Biology (CCTB) at the University of Würzburg.

My research interests are the development and application of algorithms, tools and workflows to generate knowledge from biomedical data. Currently, my focus is on the possibilities and limitations of machine learning and artificial inteligence in biomedical research. Additionally, I engage in knowledge transfer with local businesses as part of the ESF-ZDEX Project.

Projects and Activities

Markus J. Ankenbrand's Projects

alitv icon alitv

Visualize whole genome alignments as linear maps

antigen icon antigen

A plugin manager for zsh, inspired by oh-my-zsh and vundle.

aoc2021 icon aoc2021

https://adventofcode.com/ 2021 - solutions in julia, mostly quick and dirty

aoc2022 icon aoc2022

Advent of Code 2022 - solutions in julia (or R or python or perl or ...), mostly quick and dirty

bioimageanalysisnotebooks icon bioimageanalysisnotebooks

Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more

classifier icon classifier

RDP extensible sequence classifier for fungal lsu, bacterial and archaeal 16s

dalli-klick icon dalli-klick

Quick and simple implementation of dalli klick in react

devcamp17 icon devcamp17

Developer Camp 2017 – Your notes & everything else

devcamp18 icon devcamp18

Developer Camp 2018 – notes, sessions, and everything else

fennec icon fennec

Functional Exploration of Natural Networks and Ecological Communities

fidgit icon fidgit

An ungodly union of GitHub and Figshare

gggenomes icon gggenomes

A grammar of graphics for comparative genomics

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