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Institute for Bioinformatics and Evolutionary Studies's Projects

aper icon aper

Analyzing Positional Error in Reads

arc icon arc

Assembly by Reduced Complexity (ARC)

clearcut icon clearcut

This is clearcut, the reference implementation for the Relaxed Neighbor Joining algorithm.

dbchelpers icon dbchelpers

Helper tools for pre and post dbcAmplicon runs.

evalyn icon evalyn

EVALYN - A evolutionary computation approach to evolving high-quality guide trees and multiple sequence alignments.

grc_scripts icon grc_scripts

Executable R and Python scripts for the Genomics Resources Core

grcscripts2 icon grcscripts2

University of Idaho Genomics Resources Core HTS Processing scripts as an R package

htstream icon htstream

A high throughput sequence read toolset using a streaming approach facilitated by Linux pipes

khmer icon khmer

In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

seed icon seed

R/Shiny application for viewing microbial community data

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