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Huwenbo Shi's Projects

cocacola icon cocacola

COCACOLA: a general framework for binning contigs in metagenomic studies incorporating read COverage, CorrelAtion, sequence COmposition and paired-end read LinkAge

hess icon hess

Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.

hess30 icon hess30

Local SNP-heritability estimates for the 30 traits in Shi et al. AJHG 2016

impg icon impg

Gaussian imputation of GWAS summary statistics

mind icon mind

Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution

oceandeep icon oceandeep

dark colorscheme, pleasant, mainly blue and blueish-green

pesca icon pesca

Estimating proportion of population-specific and shared causal variants

s-ldxr icon s-ldxr

Stratified squared trans-ethnic genetic correlation

twas_impg icon twas_impg

Code for compile ImpG-Summary-Cor and ImpG-Summary-GenBeta-Cor for TWAS

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