hongxinxiang Goto Github PK

awesome-ai-bioinformatics

A curated list of awesome AI and Bioinformatics.

awesome-drug-discovery

A collection of drug discovery, classification and representation learning papers with deep learning.

awesome-multimodal-ml

Reading list for research topics in multimodal machine learning

awesome-vit

cgip

A simple and effective Contrastive Graph-Image Pre-training framework for molecular representation learning (BIB)

ddpm-segmentation

Label-Efficient Semantic Segmentation with Diffusion Models (ICLR'2022)

deeppurpose

A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)

diffusers

🤗 Diffusers: State-of-the-art diffusion models for image and audio generation in PyTorch

diffusion-models-papers-survey-taxonomy

Diffusion model papers, survey, and taxonomy

digress

code for the paper "DiGress: Discrete Denoising diffusion for graph generation"

drkg

A knowledge graph and a set of tools for drug repurposing

egnn-pytorch

Implementation of E(n)-Equivariant Graph Neural Networks, in Pytorch

fs-mol

FS-Mol is A Few-Shot Learning Dataset of Molecules, containing molecular compounds with measurements of activity against a variety of protein targets. The dataset is presented with a model evaluation benchmark which aims to drive few-shot learning research in the domain of molecules and graph-structured data.

gan-loss-pytorch

Generative Adversarial Network Loss Summary

grammarvae

Code for the "Grammar Variational Autoencoder" https://arxiv.org/abs/1703.01925

grover

This is a Pytorch implementation of the paper: Self-Supervised Graph Transformer on Large-Scale Molecular Data

hongxinxiang.github.io

Personal website

imagemol

ImageMol is a molecular image-based pre-training deep learning framework for computational drug discovery.

lincs_target_prediction

Predicting drug targets using the NIH LINCS project's L1000 dataset.

ml-for-compound-potency-prediction

mmf

A modular framework for vision & language multimodal research from Facebook AI Research (FAIR)

murphysec

An open source tool focused on software supply chain security. 墨菲安全专注于软件供应链安全，具备专业的软件成分分析（SCA）、漏洞检测、专业漏洞库。

pocket2mol

Pocket2Mol: Efficient Molecular Sampling Based on 3D Protein Pockets

pytorch-gan

PyTorch implementations of Generative Adversarial Networks.

pytorch-image-models

PyTorch image models, scripts, pretrained weights -- ResNet, ResNeXT, EfficientNet, EfficientNetV2, NFNet, Vision Transformer, MixNet, MobileNet-V3/V2, RegNet, DPN, CSPNet, and more

pytorch-loss

label-smooth, amsoftmax, partial-fc, focal-loss, triplet-loss, lovasz-softmax. Maybe useful

pytorch-multi-gpu-training-tutorial

torchdrug

A powerful and flexible machine learning platform for drug discovery

torchgan

Research Framework for easy and efficient training of GANs based on Pytorch

uni-core

an efficient distributed PyTorch framework