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performance about vizviva_brats_2021 HOT 6 CLOSED

himashi92 avatar himashi92 commented on September 26, 2024
performance

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Comments (6)

himashi92 avatar himashi92 commented on September 26, 2024

Hello, can you explain your problem a bit more?

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H-CODE6 avatar H-CODE6 commented on September 26, 2024

OK, thank you very much for your reply. I've been studying your code recently.brats_train.py in dataset folder , I found that only patient_image, patient_label = pad_or_crop_image(patient_image, patient_label, target_size=(128, 128, 128)) was added in training, but not in val. therefore, I also added patient_image, patient_label = pad_or_crop_image(patient_image, patient_label, target_size=(128, 128, 128)). I found that the performance decreased greatly. I don't know why? Did you cut out the core area when cutting? Or any other reason, looking forward to your reply.

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himashi92 avatar himashi92 commented on September 26, 2024

Hi, during validation you have to consider the entire MRI volume, not just cropped(128x128x128) and padded patch. We cut unnecessary background pixels as we need to learn more features of the region of interest, during training. That's why I used the crop_and_pad function only during training.

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H-CODE6 avatar H-CODE6 commented on September 26, 2024

Thank you very much for your reply. I'd like to ask you if you want to unify the size to 128128128 during verification, so that you can enter the model. Is there any method you can use and any distress? I look forward to your reply.

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himashi92 avatar himashi92 commented on September 26, 2024

Why do you need to crop the input during verification? I still don't understand your question here :)

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H-CODE6 avatar H-CODE6 commented on September 26, 2024

Hello, author. In your paper, I found that you finally ran 100epoch to train. Would you please tell me why you chose 100epoch?

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