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Hi there! šŸ‘‹ I'm Himal.

I am a bioinformatician at the Microbiological Diagnostic Unit Public Health Laboratory (MDU PHL), The University of Melbourne, where I work on developing and validating bioinformatics pipelines for analysing pathogen genomes in the context of public health and surveillance. My work aims to improve the detection, diagnosis, and treatment of infectious diseases using genomic data.

About Me

  • šŸŽ“ PhD in Bioinformatics from Nematode and Vector Genomics Laboratory, La Trobe University, Australia
  • šŸ§¬ Research focus: Bioinformatics and Modeling to understand transmission dynamics of infectious diseases
  • šŸ’” Strong interest in integrating genomic, environmental, and epidemiological data
  • šŸ’» Competencies: Bioinformatic analysis, Population genetics, Landscape genetics, Spatial modelling, Infectious disease modelling, Statistical analysis
  • šŸ˜„ Pronouns: he/him
  • šŸ”­ Iā€™m currently working on developing bioinformatics pipelines for typing bacterial pathogens
  • šŸŒ± Iā€™m currently learning Nextflow
  • šŸ“– I'm currently reading Measuring the World by Daniel Kehlmann

Himal Shrestha's Projects

idmodel-oncho icon idmodel-oncho

A shiny app which allows the exploration of the dynamics of onchocerciasis transmission

oncho_gis icon oncho_gis

Files related to geospatial modelling of onchocerciasis.

sdm-codes icon sdm-codes

This comprises scripts for species distribution modelling that I am doing for my PhD project.

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