Related Issues (20)
- Support easy Cohort creation
- Annoying conflicts between patient-attributes & variables in `additional_data`
- Invalid RGBA argument error using `plot_survival` HOT 3
- Make cohorts more workflow-engine and cloud storage friendly
- Help with creating a cohort HOT 14
- Error using median_vaf_purity on a combined-polyphen-snpeff.vcf HOT 6
- ImportError: cannot import name 'AlleleParseError' HOT 2
- Update README & documentation to match current usage
- Explain why predicted neoantigens are NaN when HLA types missing
- Set mhcflurry as the default MHC binding predictor
- plot_survival for the whole cohort, not "on" something
- logging does not respond to user-configured level
- KeyError when predicting neoantigens
- Capture logger output when caching a result
- Test new parameters - fail_on_missing_bams, etc
- Refactor `_load_single_patient_variants` function
- Don't cache after only top-priority effects; post-filter instead HOT 3
- all_effects caches, but does not return, all effects HOT 1
- ExonicSpliceSite with Subsitution/etc. alternate_effect is not included in filtering
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from cohorts.