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2018_code_calendar_wallpaper_macos

your favorite wallpaper + code calendar = code calendar wallpaper

3p-clr

abc

above

R package for analysis of animal movement and environment data - primarily for internal collaboration of Animals on the Move / ABoVE project

admixinfer-fast

Length Distribution of Ancestral Tracks under a General Admixture Model and Its Applications in Population History Inference

admixture_graph

Module for analysing admixture graphs

alpha

A toolkit for automated local phylogenomic analyses, or ALPHA

ancestry

program to estimate admixture coefficients from individual genotype or sequence data

ancestry_pipeline

Provides helper scripts for inferring local ancestry, performing ancestry-specific PCA, etc

argos-dive-analysis

ARGOS satellite telemetry dive analysis

basic_spatial

Basic Spatial (bird tracking) data analysis in R

bayeslopod

Natural history museums and herbaria collectively hold hundreds of millions of zoological, botanical, and paleontological specimens. These collections serve as the foundation for understanding the distribution of life on Earth and the basis for addressing loss of biodiversity, emerging diseases, and other pressing global problems as well as important question in ecology and evolution. One of the short comings of these kind of data is that the lack of evidence of the presence of a species in a certain region does not mean the species is truly absent there. Likewise, specimens are often misidentified, and therefore the report of a species in a locality is not always evidence that a viable population occurs there. The goal of this project is to develop a method which could be used to estimate the probability of presence of a species in a certain study region based on certain sampling effort and presence reports.

bioinformatics123

biopython-cn

Biopython Tutorial Chinese Translation

bird-migration-flow-visualization

Bird migration flow visualization

book

Compiled and pretty version of labs (updated with a bit of lag)

case-study

Bird migration case study from the Netherlands and Belgium

climgrid

An R package for obtaining and analyzing global climate oscillation indices and gridded climate data

copenhagen2016tutorial

Tutorial of ngsTools and ANGSD for Copenhagen 2016 course students

coursera_bioinformatics_for_beginners

python scripts for the Coursera Bioinformatics for Beginners

cptcmap-pkg

cptcmap.m: color palette tables (.cpt) for Matlab

cuckoo_habitatuse_scripts

Code to extract, manipulate, analyse and create maps using Argos satellite tag data: uses GIS-type analyses in R

d3

Bring data to life with SVG, Canvas and HTML. :bar_chart::chart_with_upwards_trend::tada:

dadi

Automatically exported from code.google.com/p/dadi

dadi_pipeline

An accessible and flexible tool for fitting demographic models with dadi using custom or published models (available here), conducting goodness of fit tests, and plotting.

data-science-at-the-command-line

Data Science at the Command Line

data-viz-resources

A list of packages, resources, and other documents that are useful for data visualization.

dataviz

A book covering the fundamentals of data visualization.

deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

dna-seq-analysis

DNA sequencing analysis notes from Ming Tang