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acropora_digitifera_wgs

admixture-wrapper

A tool to automate analyses in admixture, a program used for detecting population structure with SNP data.

biogeoamazonia

conda_on_the_cluster

A brief tutorial introducing learners to the Conda environment and package management system.

ev1_selectionmetaanalysis

Vignette and research project developed under the AES ERC Networking Grant Scheme.

furseal-demography

Workflow used in "Demographic reconstruction of Antarctic fur seals supports the krill surplus hypothesis."

genomics

Sphinx documentation source for a computational genomics tutorial.

in-depth-ngs-data-analysis-course

james_et_al._2021-mbe

Code and data for: James ME et al. (2021) Highly replicated evolution of parapatric ecotypes. Molecular Biology and Evolution. https://doi.org/10.1093/molbev/msab207

kp_dadi

A workflow for manually optimising the Diffusion Approximations for Demographic Inference (dadi) regarding population genomics analyses.

markravinet.github.io

Github website

mmatschiner_tutorials

Tutorials on phylogenetic and phylogenomic inference

msmc-tools

Tools and Utilities for msmc and msmc2

msmc2_scripts

MSMC2 Scripts

physalia-lcwgs

Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 11-14, 2021

pophistory-tutorial

Tutorial on using popular tools for learning about population history

rda-landscape-genomics

seascape_rda_tutorial

Tutorial for performing redundancy analysis

smcpp

SMC++ infers population history from whole-genome sequence data.

snakes-demographic-history

Code used for demographic history analysis. PSMC and downstream processing

speciationgenomics.github.io

Repository for speciation genomics website

wrangling-genomics

Data Wrangling and Processing for Genomics