Comments (4)
Hi @pioneer-pi ,
After you built from source, you can run the binaries with commands like:
python3 bazel-out/k8-opt/bin/deepvariant/call_variants.zip --help
(like this line here: https://github.com/google/deepvariant/blob/r1.6/build_and_test.sh#L64 )
- Yes you need to recompile.
Usually, in the same client, I'd do something like:
source settings
bazel build -c opt ${DV_COPT_FLAGS} --build_python_zip :binaries
(similar to https://github.com/google/deepvariant/blob/r1.6/build_release_binaries.sh#L104-L110)
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@pichuan Thank you very much. I wonder what the difference between bazel-in and bazel-out/k8-opt/bin? I found they are both runnable files.
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You should be able to use either of them in this setup after you build.
The zip files were built here https://github.com/google/deepvariant/blob/r1.6/build_release_binaries.sh
When you built it on the machine, I think both versions should run fine (and the behaviors are the same)
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Hi @pioneer-pi , #756 (comment) can also relevant.
I'll close this issue now.
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