GPU installation failure with pip about deepconsensus

[danielecook]

Hi @jsoghigian I am currently trying to resolve this. Are you able to easily switch python versions? I think downgrading to Python 3.9 might resolve the issue, but I am still testing this.

[jsoghigian]

thanks @danielecook , that allowed me to install deepconsensus and the test data ran flawlessly!

[pgrosu]

Hi @jsoghigian,

Didn't see Daniel's comment, as I was typing -- so try that first before mine. This will be tricky to fix, but try the following afterwards:

1. Create a file called constraints.txt, and add the following to it:

cython < 3.0

2. The re-launch the requirements like this:

PIP_CONSTRAINT=constraints.txt pip3 install -r requirements.txt --no-cache

Let me know if this fixes it.

Thx,
~p