ggloor Goto Github PK

3390

9545

9545 Bioinformatics 1: R and compositions

aic

tests to see if datasets are compostional

aldex2_dev

ALDEx tool to examine compositional high-throughput sequence data with Welch's t-test

aldex_bioc

ALDEx_bioc is the working directory for updating bioconductor

amicomp

Shiny app for compositional data pathologies and transforms

book

cjm_supplement

Supplementary data for: Compositional analysis: a valid approach to analyze microbiome high throughput sequencing data

coda_ajs

coda_microbiome_tutorial

Workshop for NGS'18 conference, Barcelona 2018

codaseq

Functions for compositional analysis of high throughput sequencing

compositions

Site that contains musings and code for compositional analysis of high throughput sequencing experiments

covid-reentry

cv

cv

datasets

datasets and descriptions

disteffect

Distributional non-parametric effect size package

effect

paper on effect sizes

frontiers_2017

Supplement for Frontiers article

ggloor.github.io

home page and cv

mimb_2018

Supplement for Methods in Molecular Biology 2018

miseq_bin

Standard tools and protocols for MiSeq amplicon sequencing of 16S rRNA genes

petition

Sample letters to send

propr

Ways to measure strength of proportionality

q2-aldex2

qiime2 plugin for aldex2 for differential abundance analysis

recipes

Family and favourite recipes

tests-as-linear

Common statistical tests are linear models (or: how to teach stats)

twntyfr

working-papers