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msolleder avatar msolleder commented on August 23, 2024

We tested MixMHCp on Ubuntu 18.04 with ./MixMHCp -i test/test.txt -o test/out -m 3 and had no issues.

From what we understand from your error given above, line 26 in "calling-ggseqlogoMOD.r" caused the issue. Our original code is source(paste(pathLib, 'R/ggseqlogo.r', sep = '')), however it seems that this was changed in your code into source(paste(pathLib, 'R/ggseqlogo.R', sep = '')) and thereby not finding the files in "MixMHCp-2.1/lib/R/".

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courcelm avatar courcelm commented on August 23, 2024

@msolleder I just reviewed code in https://github.com/GfellerLab/MixMHCp/archive/v2.1.tar.gz. There is different case for the extension of the files and the one found in calling-ggseqlogoMOD.r . Your master branch doesn't have this issue.

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