gerstung-lab Goto Github PK
Name: Gerstung Lab
Type: Organization
Bio: Division for AI in Oncology at DKFZ
Location: Germany
Name: Gerstung Lab
Type: Organization
Bio: Division for AI in Oncology at DKFZ
Location: Germany
Code accompanying Precision oncology for acute myeloid leukemia using a knowledge bank approach
An R package to process and predict risk of adenocarcinoma progression from shallow whole-genome sequencing data.
Code for the "Spatial genomics maps the structure, nature and evolution of cancer clones" paper
Code repository for the longitudinal and phylodynamic analysis in "The longitudinal dynamics and natural history of clonal haematopoiesis"
Efficient Wright-Fisher simulations for intra-tumour population genetics
An R package containing high-dimensional extensions of the Cox model
The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.
An R package for Empirical Bayes MultiState models
R code for Combining gene mutation with gene expression data improves outcome prediction in myelodysplastic syndromes
C. elegans and ICGC cancer data analysis for (Meier, Volkova et al. 2017)[https://www.biorxiv.org/content/biorxiv/early/2017/06/13/149153.full.pdf].
MPN multistage calculator
Codes for a publication about mutation accumulation in >60 DNA repair deficient C. elegant lines (Meier et al, under preparation).
An R package to time somatic mutations
Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis
Code accompanying "The evolutionary history of 2,658 cancers", Nature 578, 122–128 (2020)
Decoding of image-based spatial transcriptomics
Code accompanying Prediction of AML risk in healthy individuals by Abelson, Collord, et al. (2018), Nature, 559:400-404
Probabilistic Cox Regression
Codes for the analysis of C. elegant samples of different DNA repair deficient backgrounds exposed to ionising radiation.
SARS-CoV-2 genomic surveillance in Germany
International SARS-CoV-2 surveillance
Spatiotemporal analysis of strain-specific B.1.1.7 SARS-CoV-2 infection dynamics
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.