Comments (1)
Hi,
I'm running simka on around 1000 samples with a total of 45 billion reads.
simka -in simka_input.txt -out results_simka -out-tmp temp_output -simple-dist -max-count 6 -max-merge 18 -nb-cores 112 -max-memory 100000
In the first two days it creates the following folders:
drwxr-xr-t 2 28039 Jun 17 14:32 input drwxr-xr-t 2 0 Jun 17 14:32 merge_synchro drwxr-xr-t 2 0 Jun 17 14:32 stats drwxr-xr-t 2 0 Jun 17 14:32 job_count drwxr-xr-t 2 0 Jun 17 14:32 job_merge -rw-r--r-- 1 10989 Jun 17 14:32 datasetIds -rw-r--r-- 1 46824 Jun 17 14:38 config.h5 drwxr-xr-t 344 8782 Jun 17 14:38 solid drwxr-xr-t 2 38016 Jun 19 06:13 log drwxr-xr-t 7 140 Jun 19 06:15 temp drwxr-xr-t 2 31850 Jun 19 06:15 kmercount_per_partition drwxr-xr-t 2 30854 Jun 19 06:15 count_synchro
But since June 19th nothing has happened, but the job is still running. Is this normal? Should I keep waiting?
Hi, I met the same problem as you said. I wonder how you solve the problem. Can you please give me some comments? Thanks very much!
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Related Issues (20)
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