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atlas

belsap

guess what...?

combisv

Combine structural variation outputs from long sequencing reads into a superior call set

config-repo

sample config repo for config server

containers

Bioinformatics containers

deeprespred-back

gameover

Leading board

gariem.github.io

julia-samples-images

Image processing with Julia 0.4.5

megahit

Ultra-fast and memory-efficient (meta-)genome assembler

mouse-pipelines

Genomic Pipelines for classical and wild-derived mouse strains

mouse-sv-pipeline

Mouse SV Pipeline

phold

Phage Annotation using Protein Structures

react-java-starter-kit

Project templates for ReactJS (Router+Redux) and Spring-Boot(JPA+DataRest)

reveal

This pipeline takes screenshots of genomic regions using IGV

samples

Spring Boot, Image processing with JuliaLang, and other examples

singularity-reveal

Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client

spock-utils

A simple library that provides basic data consumption and reporting for Spock and Appium

survivor

Toolset for SV simulation, comparison and filtering

sv-code

test-visualization

Example of Data Visualization Using D3, Google Maps and KML

tools

Python package with helper tools for the nf-core community.

variation

Structural Variation Pipelines

viroprofiler

A containerized bioinformatics pipeline for viral metagenomic data analysis