fredericlemoine Goto Github PK
Type: User
Company: Institut Pasteur @evolbioinfo @C3BI-pasteur-fr
Location: Paris
fredericlemoine's Projects
awesome-pipeline
A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin
bam2introns
bammask
big.phylo
An R package to construct phylogenies for very large numbers of sequences
bioconda-recipes
Conda recipes for the bioconda channel.
bitset
Go package implementing bitsets
cobrashell
condor
ConDor: a workflow to detect convergent evolution in large protein alignments
configs
Config files used to define parameters specific to compute environments at different Institutions
covseqclade
date2epiweek
ebolaguinea2014
Phylogenetic analysis of 2014 Ebolavirus outbreak in Guinea.
essai2
fastqutils
fr-rn
French Reproducibility Network website
godocker
golaxy
golaxy : interacting with Galaxy in Go
gostats
gota
Gota: DataFrames and data wrangling in Go (Golang)
integron_finder
Bioinformatics tool to find integrons in bacterial genomes
modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
nextflow
A DSL for data-driven computational pipelines
pangolin
Software package for assigning SARS-CoV-2 genome sequences to global lineages.
pastml
Prediction of Ancestral STate using the Maximum-Likelihood method
phyml
PhyML -- Phylogenetic estimation using (Maximum) Likelihood
pytreedraw
Drawing phylogenetic trees in python
reprohackathon_ismb2023
reprovirtuflow
rna-pipeline
RNA-Seq pipeline with nextflow and docker
s3lib
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