fpezzini Goto Github PK
Name: Flavia Pezzini
Type: User
Company: Royal Botanic Garden Edinburgh
Location: Edinburgh, UK
Flavia Pezzini's Projects
basic_hyb_seq_assembly
A simple Hyb_Seq pipeline for conservatively called consensus sequence
dynamicrangeevolutionanddiversification
Functions to run the DREaD model of geographic range evolution (Skeels & Cardillo 2019, AmNat)
hybpiper
Recovering genes from targeted sequence capture data
inga
My notes about the implementation of the pipeline used in Nicholls et al 2015. Codes in https://github.com/ckidner/Targeted_enrichment
jupyter_notebooks
pezzini_etal_2021_front_biogeo
In this repository I included the code used in the paper Pezzini et al. 2020 Phylogeny and biogeography of Ceiba Mill. (Malvaceae, Bombacoideae).
targeted_enrichment
Scripts and outline of pipeline to generate robust consensus sequence from targeted captured reads
yang-smith2014
My notes on running the Yang & Smith 2014 pipeline.
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