Comments (19)
charlesb
commented on August 15, 2024
I had the same issue here.
You get this error because the default property phoenix.query.timeoutMs is set to 10 minutes (https://github.com/forcedotcom/phoenix/wiki/Tuning)
What you can do is to edit (or create) your hbase-site.xml in /usr/lib/phoenix/bin/ and add the phoenix.query.timeoutMs parameter as follow: (1 hour in my config)
<property>
<name>phoenix.query.timeoutMs</name>
<value>3600000</value>
</property>
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wangxianbin1987
commented on August 15, 2024
ok，thanks，i will try and get back to you
2014-6-24 下午9:04于 "Charles Bernard" [email protected]写道：
I had the same issue here.
phoenix.query.timeoutMs 3600000
You get this error because the default property phoenix.query.timeoutMs
is set to 10 minutes (https://github.com/forcedotcom/phoenix/wiki/Tuning)
What you can do is to edit (or create) your hbase-site.xml in
/usr/lib/phoenix/bin/ and add the phoenix.query.timeoutMs parameter as
follow: (1 hour in my config)—
Reply to this email directly or view it on GitHub.
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haridsv
commented on August 15, 2024
Thanks @charlesb your solution worked for me.
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manojoati
commented on August 15, 2024
same error i am gacing, i have set the phoenix.query.timeoutMs but cout not resolve it
below is error help
Error: org.apache.phoenix.exception.PhoenixIOException: Failed after attempts=36, exceptions:
Fri Jan 09 09:21:07 CST 2015, null, java.net.SocketTimeoutException: callTimeout=60000, callDuration=62318: row '' on table 'PJM_DATASET' at region=PJM_DATASET,,1420633295836.4394a3aa2721f87f3e6216d20ebeec44., hostname=hadoopm1,60020,1420815633410, seqNum=34326 (state=08000,code=101)
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charlesb
commented on August 15, 2024
Can you paste your hbase-site.xml?
What version of hadoop (hadoop stack maybe? CDH, HDP,...) are you using?
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manojoati
commented on August 15, 2024
Hi i am getting same error Please help.
from phoenix.
manojoati
commented on August 15, 2024
ok below is my hbase configuration .
<configuration>
<property>
<name>dfs.domain.socket.path</name>
<value>/var/lib/hadoop-hdfs/dn_socket</value>
</property>
<property>
<name>hbase.client.keyvalue.maxsize</name>
<value>10485760</value>
</property>
<property>
<name>hbase.client.scanner.caching</name>
<value>100</value>
</property>
<property>
<name>hbase.client.scanner.timeout.period</name>
<value>60000000</value>
</property>
<property>
<name>hbase.cluster.distributed</name>
<value>true</value>
</property>
<property>
<name>hbase.coprocessor.master.classes</name>
<value>org.apache.phoenix.hbase.index.master.IndexMasterObserver</value>
</property>
<property>
<name>hbase.coprocessor.region.classes</name>
<value>org.apache.hadoop.hbase.coprocessor.AggregateImplementation</value>
</property>
<property>
<name>hbase.defaults.for.version.skip</name>
<value>true</value>
</property>
<property>
<name>hbase.hregion.majorcompaction</name>
<value>604800000</value>
</property>
<property>
<name>hbase.hregion.max.filesize</name>
<value>10737418240</value>
</property>
<property>
<name>hbase.hregion.memstore.block.multiplier</name>
<value>4</value>
</property>
<property>
<name>hbase.hregion.memstore.flush.size</name>
<value>536870912</value>
</property>
<property>
<name>hbase.hregion.memstore.mslab.enabled</name>
<value>true</value>
</property>
<property>
<name>hbase.hstore.blockingStoreFiles</name>
<value>10</value>
</property>
<property>
<name>hbase.hstore.compactionThreshold</name>
<value>3</value>
</property>
<property>
<name>hbase.local.dir</name>
<value>${hbase.tmp.dir}/local</value>
</property>
<property>
<name>hbase.master.info.bindAddress</name>
<value>0.0.0.0</value>
</property>
<property>
<name>hbase.master.info.port</name>
<value>60010</value>
</property>
<property>
<name>hbase.master.port</name>
<value>60000</value>
</property>
<property>
<name>hbase.regionserver.global.memstore.lowerLimit</name>
<value>0.38</value>
</property>
<property>
<name>hbase.regionserver.global.memstore.upperLimit</name>
<value>0.4</value>
</property>
<property>
<name>hbase.regionserver.handler.count</name>
<value>60</value>
</property>
<property>
<name>hbase.regionserver.info.port</name>
<value>60030</value>
</property>
<property>
<name>hbase.regionserver.wal.codec</name>
<value>org.apache.hadoop.hbase.regionserver.wal.IndexedWALEditCodec</value>
</property>
<property>
<name>hbase.rootdir</name>
<value>hdfs://hadoopctrl.dev.oati.local:8020/apps/hbase/data</value>
</property>
<property>
<name>hbase.rpc.timeout</name>
<value>1500000</value>
</property>
<property>
<name>hbase.security.authentication</name>
<value>simple</value>
</property>
<property>
<name>hbase.security.authorization</name>
<value>false</value>
</property>
<property>
<name>hbase.superuser</name>
<value>hbase</value>
</property>
<property>
<name>hbase.tmp.dir</name>
<value>/hadoop/hbase</value>
</property>
<property>
<name>hbase.zookeeper.property.clientPort</name>
<value>2181</value>
</property>
<property>
<name>hbase.zookeeper.quorum</name>
<value>hadoopm1.dev.oati.local,hadoopm2.dev.oati.local,hadoopm3.dev.oati.local</value>
</property>
<property>
<name>hbase.zookeeper.useMulti</name>
<value>true</value>
</property>
<property>
<name>hfile.block.cache.size</name>
<value>0.40</value>
</property>
<property>
<name>phoenix.client.maxMetaDataCacheSize</name>
<value>10240000</value>
</property>
<property>
<name>phoenix.clock.skew.interval</name>
<value>2000</value>
</property>
<property>
<name>phoenix.connection.autoCommit</name>
<value>false</value>
</property>
<property>
<name>phoenix.coprocessor.maxMetaDataCacheSize</name>
<value>20480000</value>
</property>
<property>
<name>phoenix.coprocessor.maxMetaDataCacheTimeToLiveM</name>
<value>180000</value>
</property>
<property>
<name>phoenix.coprocessor.maxServerCacheTimeToLiveMs</name>
<value>30000</value>
</property>
<property>
<name>phoenix.distinct.value.compress.threshold</name>
<value>1024000</value>
</property>
<property>
<name>phoenix.groupby.estimatedDistinctValues</name>
<value>1000</value>
</property>
<property>
<name>phoenix.groupby.maxCacheSize</name>
<value>102400000</value>
</property>
<property>
<name>phoenix.groupby.spillable</name>
<value>true</value>
</property>
<property>
<name>phoenix.groupby.spillFiles</name>
<value>2</value>
</property>
<property>
<name>phoenix.index.failure.handling.rebuild</name>
<value>true</value>
</property>
<property>
<name>phoenix.index.failure.handling.rebuild.interval</name>
<value>10000</value>
</property>
<property>
<name>phoenix.index.failure.handling.rebuild.overlap.time</name>
<value>300000</value>
</property>
<property>
<name>phoenix.index.maxDataFileSizePerc</name>
<value>50</value>
</property>
<property>
<name>phoenix.index.mutableBatchSizeThreshold</name>
<value>5</value>
</property>
<property>
<name>phoenix.mutate.batchSize</name>
<value>1000</value>
</property>
<property>
<name>phoenix.mutate.maxSize</name>
<value>500000</value>
</property>
<property>
<name>phoenix.query.dateFormat</name>
<value>yyyy-MM-dd HH:mm:ss</value>
</property>
<property>
<name>phoenix.query.maxGlobalMemoryPercentage</name>
<value>15</value>
</property>
<property>
<name>phoenix.query.maxGlobalMemorySize</name>
<value>2147483648</value>
</property>
<property>
<name>phoenix.query.maxGlobalMemoryWaitMs</name>
<value>10000</value>
</property>
<property>
<name>phoenix.query.maxServerCacheBytes</name>
<value>104857600</value>
</property>
<property>
<name>phoenix.query.maxSpoolToDiskBytes</name>
<value>1024000000</value>
</property>
<property>
<name>phoenix.query.maxTenantMemoryPercentage</name>
<value>100</value>
</property>
<property>
<name>phoenix.query.numberFormat</name>
<value>#,##0.###</value>
</property>
<property>
<name>phoenix.query.rowKeyOrderSaltedTable</name>
<value>true</value>
</property>
<property>
<name>phoenix.query.spoolThresholdBytes</name>
<value>20971520</value>
</property>
<property>
<name>phoenix.query.useIndexes</name>
<value>true</value>
</property>
<property>
<name>phoenix.schema.dropMetaData</name>
<value>true</value>
</property>
<property>
<name>phoenix.sequence.cacheSize</name>
<value>100</value>
</property>
<property>
<name>phoenix.stats.guidepost.per.region</name>
<value>None</value>
</property>
<property>
<name>phoenix.stats.minUpdateFrequency</name>
<value>450000</value>
</property>
<property>
<name>phoenix.stats.updateFrequency</name>
<value>900000</value>
</property>
<property>
<name>phoenix.stats.useCurrentTime</name>
<value>true</value>
</property>
<property>
<name>zookeeper.session.timeout</name>
<value>120000000</value>
</property>
<property>
<name>zookeeper.znode.parent</name>
<value>/hbase</value>
</property>
and i am using hdp 2.2
i have 4000000000 rows in my phoenix table .
please help asap.
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manojoati
commented on August 15, 2024
i have setup the phoenix.query.timeoutMs property from ambari web UI but it is not reflecting in hbase-site.xml file.
from phoenix.
manojoati
commented on August 15, 2024
<configuration>
<property>
<name>dfs.domain.socket.path</name>
<value>/var/lib/hadoop-hdfs/dn_socket</value>
</property>
<property>
<name>hbase.client.keyvalue.maxsize</name>
<value>10485760</value>
</property>
<property>
<name>hbase.client.scanner.caching</name>
<value>100</value>
</property>
<property>
<name>hbase.client.scanner.timeout.period</name>
<value>60000000</value>
</property>
<property>
<name>hbase.cluster.distributed</name>
<value>true</value>
</property>
<property>
<name>hbase.coprocessor.master.classes</name>
<value>org.apache.phoenix.hbase.index.master.IndexMasterObserver</value>
</property>
<property>
<name>hbase.coprocessor.region.classes</name>
<value>org.apache.hadoop.hbase.coprocessor.AggregateImplementation</value>
</property>
<property>
<name>hbase.defaults.for.version.skip</name>
<value>true</value>
</property>
<property>
<name>hbase.hregion.majorcompaction</name>
<value>604800000</value>
</property>
<property>
<name>hbase.hregion.majorcompaction.jitter</name>
<value>0.50</value>
</property>
<property>
<name>hbase.hregion.max.filesize</name>
<value>10737418240</value>
</property>
<property>
<name>hbase.hregion.memstore.block.multiplier</name>
<value>4</value>
</property>
<property>
<name>hbase.hregion.memstore.flush.size</name>
<value>536870912</value>
</property>
<property>
<name>hbase.hregion.memstore.mslab.enabled</name>
<value>true</value>
</property>
<property>
<name>hbase.hstore.blockingStoreFiles</name>
<value>10</value>
</property>
<property>
<name>hbase.hstore.compactionThreshold</name>
<value>3</value>
</property>
<property>
<name>hbase.local.dir</name>
<value>${hbase.tmp.dir}/local</value>
</property>
<property>
<name>hbase.master.info.bindAddress</name>
<value>0.0.0.0</value>
</property>
<property>
<name>hbase.master.info.port</name>
<value>60010</value>
</property>
<property>
<name>hbase.master.loadbalancer.class</name>
<value>org.apache.phoenix.hbase.index.balancer.IndexLoadBalancer</value>
</property>
<property>
<name>hbase.master.port</name>
<value>60000</value>
</property>
<property>
<name>hbase.region.server.rpc.scheduler.factory.class</name>
<value>org.apache.phoenix.hbase.index.ipc.PhoenixIndexRpcSchedulerFactory</value>
</property>
<property>
<name>hbase.regionserver.global.memstore.lowerLimit</name>
<value>0.38</value>
</property>
<property>
<name>hbase.regionserver.global.memstore.upperLimit</name>
<value>0.4</value>
</property>
<property>
<name>hbase.regionserver.handler.count</name>
<value>60</value>
</property>
<property>
<name>hbase.regionserver.info.port</name>
<value>60030</value>
</property>
<property>
<name>hbase.regionserver.wal.codec</name>
<value>org.apache.hadoop.hbase.regionserver.wal.IndexedWALEditCodec</value>
</property>
<property>
<name>hbase.rootdir</name>
<value>hdfs://hadoopctrl.dev.oati.local:8020/apps/hbase/data</value>
</property>
<property>
<name>hbase.rpc.timeout</name>
<value>1500000</value>
</property>
<property>
<name>hbase.security.authentication</name>
<value>simple</value>
</property>
<property>
<name>hbase.security.authorization</name>
<value>false</value>
</property>
<property>
<name>hbase.superuser</name>
<value>hbase</value>
</property>
<property>
<name>hbase.tmp.dir</name>
<value>/hadoop/hbase</value>
</property>
<property>
<name>hbase.zookeeper.property.clientPort</name>
<value>2181</value>
</property>
<property>
<name>hbase.zookeeper.quorum</name>
<value>hadoopm1.dev.oati.local,hadoopm2.dev.oati.local,hadoopm3.dev.oati.local</value>
</property>
<property>
<name>hbase.zookeeper.useMulti</name>
<value>true</value>
</property>
<property>
<name>hfile.block.cache.size</name>
<value>0.40</value>
</property>
<property>
<name>phoenix.client.maxMetaDataCacheSize</name>
<value>10240000</value>
</property>
<property>
<name>phoenix.clock.skew.interval</name>
<value>2000</value>
</property>
<property>
<name>phoenix.connection.autoCommit</name>
<value>false</value>
</property>
<property>
<name>phoenix.coprocessor.maxMetaDataCacheSize</name>
<value>20480000</value>
</property>
<property>
<name>phoenix.coprocessor.maxMetaDataCacheTimeToLiveM</name>
<value>180000</value>
</property>
<property>
<name>phoenix.coprocessor.maxServerCacheTimeToLiveMs</name>
<value>30000</value>
</property>
<property>
<name>phoenix.distinct.value.compress.threshold</name>
<value>1024000</value>
</property>
<property>
<name>phoenix.groupby.estimatedDistinctValues</name>
<value>1000</value>
</property>
<property>
<name>phoenix.groupby.maxCacheSize</name>
<value>102400000</value>
</property>
<property>
<name>phoenix.groupby.spillable</name>
<value>true</value>
</property>
<property>
<name>phoenix.groupby.spillFiles</name>
<value>2</value>
</property>
<property>
<name>phoenix.index.failure.handling.rebuild</name>
<value>true</value>
</property>
<property>
<name>phoenix.index.failure.handling.rebuild.interval</name>
<value>10000</value>
</property>
<property>
<name>phoenix.index.failure.handling.rebuild.overlap.time</name>
<value>300000</value>
</property>
<property>
<name>phoenix.index.maxDataFileSizePerc</name>
<value>50</value>
</property>
<property>
<name>phoenix.index.mutableBatchSizeThreshold</name>
<value>5</value>
</property>
<property>
<name>phoenix.mutate.batchSize</name>
<value>1000</value>
</property>
<property>
<name>phoenix.mutate.maxSize</name>
<value>500000</value>
</property>
<property>
<name>phoenix.query.dateFormat</name>
<value>yyyy-MM-dd HH:mm:ss</value>
</property>
<property>
<name>phoenix.query.maxGlobalMemoryPercentage</name>
<value>15</value>
</property>
<property>
<name>phoenix.query.maxGlobalMemorySize</name>
<value>2147483648</value>
</property>
<property>
<name>phoenix.query.maxGlobalMemoryWaitMs</name>
<value>10000</value>
</property>
<property>
<name>phoenix.query.maxServerCacheBytes</name>
<value>104857600</value>
</property>
<property>
<name>phoenix.query.maxSpoolToDiskBytes</name>
<value>1024000000</value>
</property>
<property>
<name>phoenix.query.maxTenantMemoryPercentage</name>
<value>100</value>
</property>
<property>
<name>phoenix.query.numberFormat</name>
<value>#,##0.###</value>
</property>
<property>
<name>phoenix.query.rowKeyOrderSaltedTable</name>
<value>true</value>
</property>
<property>
<name>phoenix.query.spoolThresholdBytes</name>
<value>20971520</value>
</property>
<property>
<name>phoenix.query.timeoutMs</name>
<value>60000000</value>
</property>
<property>
<name>phoenix.query.useIndexes</name>
<value>true</value>
</property>
<property>
<name>phoenix.schema.dropMetaData</name>
<value>true</value>
</property>
<property>
<name>phoenix.sequence.cacheSize</name>
<value>100</value>
</property>
<property>
<name>phoenix.stats.guidepost.per.region</name>
<value>None</value>
</property>
<property>
<name>phoenix.stats.minUpdateFrequency</name>
<value>450000</value>
</property>
<property>
<name>phoenix.stats.updateFrequency</name>
<value>900000</value>
</property>
<property>
<name>phoenix.stats.useCurrentTime</name>
<value>true</value>
</property>
<property>
<name>zookeeper.session.timeout</name>
<value>120000000</value>
</property>
<property>
<name>zookeeper.znode.parent</name>
<value>/hbase</value>
</property>
ok here is final hbase-site.configuration
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manojoati
commented on August 15, 2024
jdbc:phoenix:hadoopm1> Select count(*) from PJM_DATASET;
here is query and below is the execption.
java.lang.RuntimeException: org.apache.phoenix.exception.PhoenixIOException: org.apache.phoenix.exception.PhoenixIOException: Failed after attempts=36, exceptions:
Sat Jan 10 05:06:02 CST 2015, null, java.net.SocketTimeoutException: callTimeout=60000, callDuration=62320: row '' on table 'PJM_DATASET' at region=PJM_DATASET,,1420633295836.4394a3aa2721f87f3e6216d20ebeec44., hostname=hadoopm1,60020,1420887782278, seqNum=34350
at sqlline.SqlLine$IncrementalRows.hasNext(SqlLine.java:2440)
at sqlline.SqlLine$TableOutputFormat.print(SqlLine.java:2074)
at sqlline.SqlLine.print(SqlLine.java:1735)
at sqlline.SqlLine$Commands.execute(SqlLine.java:3683)
at sqlline.SqlLine$Commands.sql(SqlLine.java:3584)
at sqlline.SqlLine.dispatch(SqlLine.java:821)
at sqlline.SqlLine.begin(SqlLine.java:699)
at sqlline.SqlLine.mainWithInputRedirection(SqlLine.java:441)
at sqlline.SqlLine.main(SqlLine.java:424)
0: jdbc:phoenix:hadoopm1>
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manojoati
commented on August 15, 2024
please help what wrong i am doing.
from phoenix.
charlesb
commented on August 15, 2024
Seems like something else times out. Have you tried to scan this table from your hbase client (hbase shell)?
Check this: http://hbase.apache.org/book/ch15s15.html (pragraph titled Connection Timeouts)
from phoenix.
manojoati
commented on August 15, 2024
i have one master and three slaves .. i uninstall and reinstall the hbase and phoenix at master and install the hbase at other slave machin but now i am even not able to start the hbase master from ambari.. web UI
from phoenix.
manojoati
commented on August 15, 2024
RegionServer
at org.apache.hadoop.hbase.regionserver.HRegionServer.constructRegionServer(HRegionServer.java:2486)
at org.apache.hadoop.hbase.regionserver.HRegionServerCommandLine.start(HRegionServerCommandLine.java:61)
at org.apache.hadoop.hbase.regionserver.HRegionServerCommandLine.run(HRegionServerCommandLine.java:85)
at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:70)
at org.apache.hadoop.hbase.util.ServerCommandLine.doMain(ServerCommandLine.java:126)
at org.apache.hadoop.hbase.regionserver.HRegionServer.main(HRegionServer.java:2501)
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
at org.apache.hadoop.hbase.regionserver.HRegionServer.constructRegionServer(HRegionServer.java:2484)
... 5 more
Caused by: java.lang.RuntimeException: java.lang.ClassNotFoundException: Class org.apache.phoenix.hbase.index.ipc.PhoenixIndexRpcSchedulerFactory not found
at org.apache.hadoop.conf.Configuration.getClass(Configuration.java:2076)
at org.apache.hadoop.hbase.regionserver.HRegionServer.(HRegionServer.java:617)
... 10 more
Caused by: java.lang.ClassNotFoundException: Class org.apache.phoenix.hbase.index.ipc.PhoenixIndexRpcSchedulerFactory not found
at org.apache.hadoop.conf.Configuration.getClassByName(Configuration.java:1982)
at org.apache.hadoop.conf.Configuration.getClass(Configuration.java:2074)
... 11 more
from phoenix.
manojoati
commented on August 15, 2024
above is the current error i got from hbase regionserver log.
from phoenix.
manojoati
commented on August 15, 2024
ok one question do we need to installed phoenix at the same machine where we have region server. ?
from phoenix.
jtaylor-sfdc
commented on August 15, 2024
Phoenix moved to Apache over a year ago, so this site is no longer
active nor maintained. Please post your question on our Apache mailing
list and you'll likely get more help:
http://phoenix.apache.org/mailing_list.html
from phoenix.
manojoati
commented on August 15, 2024
ok thanks i will
from phoenix.
manojoati
commented on August 15, 2024
2015-01-14 02:27:57,512 WARN [DataStreamer for file /apps/hbase/data/WALs/hadoopm2.dev.oati.local,60020,1421221188209/hadoopm2.dev.oati.local%2C60020%2C1421221188209.1421223957430 block BP-337983189-10.100.227.107-1397418605845:blk_1073948934_216462] hdfs.DFSClient: DataStreamer Exception
java.io.IOException: Failed to replace a bad datanode on the existing pipeline due to no more good datanodes being available to try. (Nodes: current=[10.100.227.107:50010, 10.100.227.104:50010], original=[10.100.227.107:50010, 10.100.227.104:50010]). The current failed datanode replacement policy is DEFAULT, and a client may configure this via 'dfs.client.block.write.replace-datanode-on-failure.policy' in its configuration.
at org.apache.hadoop.hdfs.DFSOutputStream$DataStreamer.findNewDatanode(DFSOutputStream.java:1041)
at org.apache.hadoop.hdfs.DFSOutputStream$DataStreamer.addDatanode2ExistingPipeline(DFSOutputStream.java:1107)
at org.apache.hadoop.hdfs.DFSOutputStream$DataStreamer.setupPipelineForAppendOrRecovery(DFSOutputStream.java:1254)
at org.apache.hadoop.hdfs.DFSOutputStream$DataStreamer.processDatanodeError(DFSOutputStream.java:1005)
at org.apache.hadoop.hdfs.DFSOutputStream$DataStreamer.run(DFSOutputStream.java:549)
Wed Jan 14 04:26:19 CST 2015 Terminating regionserver
2015-01-14 04:26:19,509 INFO [Thread-11] regionserver.ShutdownHook: Shutdown hook starting; hbase.shutdown.hook=true; fsShutdownHook=org.apache.hadoop.fs.FileSystem$Cache$ClientFinalizer@48a9bc2b
Wed Jan 14 04:30:46 CST 2015 Terminating regionserver
Wed Jan 14 04:34:13 CST 2015 Terminating regionserver
2015-01-14 04:34:32,959 DEBUG [regionserver60020-EventThread] regionserver.SplitLogWorker: tasks arrived or departed
Wed Jan 14 04:58:39 CST 2015 Terminating regionserver
Wed Jan 14 05:34:36 CST 2015 Terminating regionserver
now i am getting this error on region server .
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