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flennerhag avatar flennerhag commented on May 14, 2024

Data is split sequentially based on the indexing at the start. So in general, they will share the same split (unless the number of folds is varied, but there would still be an overlap). One way around this would be to shuffle the input data between layers.

Currently, if shuffle=True, the input is shuffled at the ensemble level before any calls to the ParallelManager. To prevent sharing splits, shuffling inputs should be performed between layers, so the it needs to be moved in to the ParallelManager.process method. Shouldn't be too hard though.

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ajing avatar ajing commented on May 14, 2024

Thanks for your prompt reply!

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flennerhag avatar flennerhag commented on May 14, 2024

Not so fast :)

I think it makes sense to shuffle the samples between layers. Let's keep the issue open until implemented.

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