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2018_07_r-shiny_workshop

Kate Dodds' R shiny workshop 2018, adapted from James Lawson.

3dkud-visualisation

A series of R scripts to estimate and interactively visualise 3D KUD models of passive acoustic telemetry data.

acoustic-tracking-toolbox

R function to calculate standardised metrics of movement and activity space using passive acoustic telemetry datasets. This code is one of the outputs from the IMOS ATF Task Team and will be integrated into the VTrack R package.

argostrack

R package for fitting animal movement models to Argos (or other types of location) data

att

The Animal Tracking Toolbox is a collection of R functions that work in series to analyse passive telemetry datasets housed in cooperative databases.

biologging_data-sharing

Database queries, meeting notes and documents supporting the sharing of acoustic, archival and satellite tagging data

biologging_standardization

covid-19

Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE

crwexampleakbs

AK bearded and spotted seal example dataset and analysis.

daprocedures

detstatmethods-suppcode

Supplementary code for Whoriskey et al. Statistical methods for detection data.

dwc-for-biologging

Darwin Core recommendations for biologging data

edna-expeditions

Technical documentation for the eDNA Expeditions project

etn-otn-exchange

European Tracking Network (ETN) and Ocean Tracking Network (OTN) data exchange issues

ganttrify

Create beautiful Gantt charts with ggplot2

github-slideshow

A robot powered training repository :robot:

github-upload

globalspatialrisk

Repository containing raw data, R scripts and the GSMP Rpackage for the manuscript "Global spatial risk assessment of sharks under the footprint of fisheries"

hmmoce

hidden markov model for psat data v.1.1

ideasotntws2020code

Supporting code for the 2020 ideasOTN telemetry workshop series

imos-user-code-library

imos_r-data-tools

A set of tools to remotely access and manipulate Australian ocean observing data generated by the Integrated Marine Observing System (IMOS) in the R environment.

intro-gam-webinar-2020

leaflet-providers

An extension to Leaflet that contains configurations for various free tile providers.

linear_and_non-linear_models

Workshop on linear and non-linear modelling by Yuri Niella

meop_qc

QC scripts to process MEOP data from tagged animals (meop.net)

mojave-dark-rstudio-theme

A Total-IDE Dark RStudio Theme inspired by Apple's dark aestheticcc.

ocs-2018-rworkshop

This contains the workshop notes for the 2018 Oceania Chondrichthyan Society meeting on Stradbroke Island in February 2018.

paper-global-footprint-of-fisheries

A public repo for code and analyses associated with the paper Tracking the Global Footprint of Fisheries

political-biogeography

Code associated with Harrison et al. 2018, Nature Ecology & Evolution