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adi2_rsfmri

Resting-state fMRI analysis with maginal models using the sandwich estimator of Guillaume et al. (2014)

adi_preproc

bmi-and-reward-connectivity-in-life-adult

This repository contains the preprint and synthesized data for the project "Higher BMI, but not obesity-related genetic polymorphisms, correlates with lower structural connectivity of the reward network in a population-based study" by Beyer et al., 2020.

brainimagingpipelines

BIPs

cca_primer

Jupyter notebook material for my CCA primer

direct_plus

Effects of a mediterranean diet (GREEN-MED) on brain structure

fmri-prereg

A second option to work with fMRI prereg

freesurfer-7t-pipeline

A freesurfer segmentation pipeline optimised for 7T datasets

hippovol

Automatic segmentation of MRI hippocampal volumes along the longitudinal axis

hypo_seg

Scripts for automated segmentation of hypothalamus with multi-atlas label fusion

leica_life

life_add_on_rsfmri

life_followup_preproc

life_ica_aroma

rs-preprocessing pipeline including ICA-AROMA and necessary pre/postprocessing

life_lemon_mod_mod

life_rs_ica_preprocessing

life_upgrade

This repository contains data and code for the project "Estimating the effect of a scanner upgrade on measures of gray matter structure for longitudinal designs" by Medawar, Beyer et al.

life_vbm_preprocessing

mediators_of_headmotion

This repository contains the scripts for the analyses of mediators between body mass index (BMI) and Head Motion.

metabolic_vbm_plsc

mriqc

Automated Quality Control and visual reports for Quality Assesment of structural (T1w, T2w) and functional MRI of the brain

mriqc_for_hcp

myelinconnect

physio2bids

Siemens physiological recording BIDS converter

pipelines

Neuroimgaing data processing pipelines used in the lab

plstuto

Tutorials to apply cross decomposition methods in python

preproc_agewell

Preprocessing for AgeWell.de MRI study

rsv_rsanalysis

preprocessing and analysis scripts for the Reveratrol study (https://doi.org/10.1016/j.neuroimage.2018.03.023)

templatebuildingexample

Just when I thought you couldn’t possibly be any dumber, you go and do something like this… and totally redeem yourself!

vrf-and-progression-of-wml

This repository contains analysis and simulation scripts for the pre-registered project on the association of vascular risk factors and progression of white matter lesions.