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Farhan's Projects

deeplabcut-analysis-jupyter-scripts icon deeplabcut-analysis-jupyter-scripts

While DLCAnalyzer and DLC Helper functions are great. They fail to accommodate a vast range of behavior investigator's needs. The Jupyter script provided here is meant for post processing/analyzing DeepLabCut (DLC) CSV files. The script allows user to filter data, calculate velocities, draw Region of Interest (ROI), and more.

dynamic_position_velocity_visualizer_for_dlc icon dynamic_position_velocity_visualizer_for_dlc

I created this notebook to help me with behavioral neuroscience experiments. It calculates the average positions and velocities of two body parts (for better accuracy), and creates visualizations such as GIFs and streamline plots to represent the motion and flow of movement.

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