fak Goto Github PK

cmpdtargets

gets targets from binding assays for a list of ChEMBL ids.

dotfiles

configuration files

export_tables

routine to export chembl tables

fak

fak.github.io

FAK posts

fakruger

landing page

genetic_ancestors

Scripts to generate simulations and plots used in blog posts on genetic and genealogical ancestry gcbias.org/category/genetic-genealogy/ . These scripts were written over a couple of afternoons and are by no means optimal ways of constructing these quantities. Hopefully they will be of use.

globalanalysis

Captures the scripts used for the PLoS CB paper

mapchemblpfam

names2ids

This script uses Cameron Neylon's (cameronneylon) chemspipy.py and Matt Swain's (mcs07) CIRpy to convert compound names to chemical identifiers.

pfam_map_loader

loader script to map list of validated domains onto ChEMBL target dictionary

pfam_maps

Django app for a web-interface to manually curate mappings of small molecule binding to Pfam-A domains

pfam_maps_project

Module to project validated Pfam domains onto the ChEMBL target dictionary and manually resolve conflicting mappings.

r2wiki

shiny-d3-showreel

adapt the d3 showreel example to get data from R

shiori

A Bootstrap-based Jekyll Theme.

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