Related Issues (20)
- Create overall structure of manual documentation
- Split reference documentation into user and dev-oriented
- Document classes and functions for user-facing reference docs
- Omnipy demo for MARS (Brokering project)
- Simplify orchestration of asynchronous tasks
- Implement ISA-JSON model in Omnipy/Pydantic
- Deploy omnipy flows on NIRD
- Figure out how to support file upload
- Implement demo tasks/flows
- Deploying / testing the BioSamples & ENA MARS services
- Switching `Dataset[Model[str]]` with `StrDataset` causes json to be evaluated
- join_tables: Multiple tables
- Update TaskTemplateArgsJobBase typing to also allow sub-flows
- Remove date/datetime validator with pydantic v2, `model_dump(mode='json')` shoul...
- Make Dataset behave like a defaultDict, possibly also with auto-expanding lists?
- Handle MultiModelDataset??
- See if it is possible to type Model mimicking of root type, e.g. with Protocol
- Improve typing of to_data/from_data. Should be limited to JSON types at least, b...
- Check if fixed in pydantic 2: Hack to fix issue with GenericModel subclasses
- While waiting for https://github.com/python/mypy/issues/9773
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