Comments (2)
Resources
Some examples:
Using a selector to get specific traces
fig.update_traces(marker=dict(color="RoyalBlue"), selector=dict(type="bar"))
Updating using 'magic underscore'
Magic underscore notation can be used in the selector to match nested properties. Here is an example of updating the color of all traces that were formally colored "MediumPurple".
fig.update_traces(marker_color="RoyalBlue",
selector=dict(marker_color="MediumPurple"))
Or in our case, we change the shape...
fig.update_traces(marker_shape="RoyalBlue")
from automappa.
I think it would make sense to use a set of marker shapes to indicate the number of markers on a contig up to greater than or equal to five
(5+
).
e.g.
circle = 0
dot = 1
circle-cross = 2
triangle-up = 3
square = 4
pentagon = 5
hexagon2 = 6+
The g.t.e. value could be set based on the respective marker set lineage using the size of the largest lineage-specific set of co-located genes
from automappa.
Related Issues (20)
- Send in PR for Automappa bioconda recipe HOT 1
- Rename dashboard tabs
- Visualize assembly graph of selected contigs HOT 2
- After contig selection is saved, automatically hide saved contigs from view. HOT 2
- Provide summary stats of bins following extraction to fasta files
- Consider using same marker sets that CheckM uses to assess purity/completeness HOT 1
- Replace default page tab icon HOT 5
- Cache expensive callbacks HOT 1
- Refactor Scatterplot callbacks HOT 1
- Prevent scatterplots axes boundaries from changing on select/hide HOT 1
- Refinements table not displaying HOT 1
- Add metagenome and markers upload modal (or buttons or card, etc.)
- 🏠 Add home tab
- An approach to editing/removing/adding "vestigial" contigs from refined bins HOT 2
- 🐳 🍎 Docker image is not compatiblele with ARM processor
- Add notification to page when browser storage limits are reached
- problem installing HOT 6
- `Transferlist` for control of which clusters to keep/discard per sample
- The upload modal should tell you what the default filename should look like
- Add functionality to download figures
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from automappa.